R is a software environment for statistical computing and graphics.
Category: Bioinformatics/Statistics
Availability: Open access for all academic users
Usage Notes
To show the software versions: module avail R
Loading the module will set the path and any necessary variables: module load R/version
Rmpi, an interface to MPI (Message-Passing Interface), is available with versions of R 2.11.1 and greater. A sample SLURM script is in the /util/academic/R directory.
See below for a presentation on R and Rmpi
Additional Information
Numerous add-on packages for R have been installed. A complete list for a given version may be viewed using the following command:
cat $R_DIR/PkgList.txt
To install an R package in user (or projects) space:
R CMD INSTALL -l /path/to/user/space/rlibs package
To load an R pacakge from user (or projects) space:
library(package, lib.loc="/path/to/user/space/rlibs/")