Software

More recent information about CCR's software offerings can be found here: https://docs.ccr.buffalo.edu/en/latest/software/modules/

MATLAB Parallel Computing Toolbox (PCT)
The MATLAB Parallel Computing Toolbox (PCT) lets you solve computationally and data-intensive problems using multicore processors, GPUs, and computer clust...
Fri, Jul 26, 2019 at 11:24 AM
miRdSNP
A database of disease-associated SNPs and microRNA target sites on 3'UTRs of human genes Category: Bioinformatics Availab...
Wed, Dec 16, 2015 at 2:52 PM
MVAPICH2
MVAPICH2 is an implementation of MPI (v2.x) for Infiniband. Category: MPI Availability: Open access for all users WARNING:...
Wed, Dec 16, 2015 at 3:04 PM
NWChem
  NWChem is a massively parallel software package with a wide array of computational chemistry functionality, for both QM, QM/MM calculations. Cat...
Fri, Dec 18, 2015 at 2:28 PM
OpenSees
OpenSees (Open System for Earthquake Engineering Simulation) is a software package for simulating the seismic response of structural and geotechnical syste...
Fri, Aug 25, 2017 at 11:32 AM
ParaView
ParaView is a CFD and numerical simulation visualization package for large data sets. Category:  Visualization Availability: Open access for all academic...
Wed, Jan 24, 2018 at 1:29 PM
PETSc
PETSc is the Portable Extensible Toolkit for Scientific Computation. Category:  Numerical Library Availability: Open access for all academic users ...
Mon, Dec 21, 2015 at 10:50 AM
Q-Chem
Q-Chem is a ab initio quantum chemistry package. Category:  Chemistry Availability: Open access for all academic users Usage Notes ...
Mon, Dec 21, 2015 at 2:28 PM
Rosetta
Rosetta Commons is a protein sequence analysis suite. Category:  Bioinformatics Availability: Free for non-commercial use but must be licensed to the rese...
Thu, Sep 7, 2017 at 3:28 PM
SAS
SAS is a software environment for statistical computing and graphics. Category:  Statistics Availability: Open access for all academic users...
Fri, Jan 8, 2016 at 9:25 AM